drighelli/VisiumExperiment: S4 Class for Spatial Experiments handling

Defines S4 classes for storing data for spatial experiments. Main examples are reported by using seqFISH and 10x-Visium Spatial Gene Expression data. This includes specialized methods for storing, retrieving spatial coordinates, 10x dedicated parameters and their handling.

Getting started

Package details

Bioconductor views DataImport DataRepresentation GeneExpression ImmunoOncology Infrastructure SingleCell
Maintainer
LicenseGPL-3
Version1.3.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("drighelli/VisiumExperiment")
drighelli/VisiumExperiment documentation built on June 8, 2021, 9:09 a.m.