drighelli/VisiumExperiment: S4 Class for Spatially Resolved -omics Data
Defines an S4 class for storing data from spatial -omics experiments. The class extends SingleCellExperiment to support storage and retrieval of additional information from spot-based and molecule-based platforms, including spatial coordinates, images, and image metadata. A specialized constructor function is included for data from the 10x Genomics Visium platform.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DataImport DataRepresentation GeneExpression ImmunoOncology Infrastructure SingleCell Spatial Transcriptomics |
| Maintainer | |
| License | GPL-3 |
| Version | 1.13.2 |
| URL | https://github.com/drighelli/SpatialExperiment |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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