order.refseq: order RefSeq ID's by validation status

In drmjc/genomics: Genomics related functions.

Description

return the order of a vector of RefSeq status's such that those that are VALIDATED come before those that are PREDICTED.

Usage

  order.refseq(x, na.last = TRUE, decreasing = FALSE)

Arguments

x	undocumented
na.last	see order
decreasing	see order

Details

Here are the status rankings: VALIDATED >> REVIEWED >> PROVISIONAL >> INFERRED >> PREDICTED = GENOME ANNOTATION = WGS 1 2 3 4 5 5 5 see ?order for equivalent method using normal integers.

Value

Undocumented return value

Author(s)

Mark Cowley, 10 April 2006

drmjc/genomics documentation built on May 15, 2019, 2:22 p.m.