cellNames: Get or set cell names from an SCESet object

In dynverse/scaterlegacy: Single-cell analysis toolkit for gene expression data in R

Description

Get or set cell names from an SCESet object

Usage

cellNames(object) <- value

cellNames(object)

## S4 replacement method for signature 'SCESet,vector'
cellNames(object)<-value

Arguments

object	An SCESet object.
value	a vector of cell names to apply to the SCESet object.

Details

Simply a wrapper to sampleNames.

Value

A vector of cell names.

Author(s)

Davis McCarthy

Examples

data("sc_example_counts")
data("sc_example_cell_info")
pd <- new("AnnotatedDataFrame", data = sc_example_cell_info)
example_sceset <- newSCESet(countData = sc_example_counts, phenoData = pd)
cellNames(example_sceset)

data("sc_example_counts")
data("sc_example_cell_info")
example_sceset <- newSCESet(countData = sc_example_counts)
cellNames(example_sceset) <- 1:ncol(example_sceset)

dynverse/scaterlegacy documentation built on Feb. 17, 2020, 5:07 a.m.