mutate: Add new variables to 'pData(object)'.

In dynverse/scaterlegacy: Single-cell analysis toolkit for gene expression data in R

Description

Adds new columns to pData(object) preserving existing variables.

Usage

mutate(object, ...)

## S4 method for signature 'SCESet'
mutate(object, ...)

mutate.SCESet(object, ...)

Arguments

object	A SCESet object.
...	Additional arguments to be passed to dplyr::mutate to act on pData(object).

Value

An SCESet object.

Examples

data("sc_example_counts")
data("sc_example_cell_info")
pd <- new("AnnotatedDataFrame", data = sc_example_cell_info)
example_sceset <- newSCESet(countData = sc_example_counts, phenoData = pd)
example_sceset <- mutate(example_sceset, is_quiescent = Cell_Cycle == "G0")

dynverse/scaterlegacy documentation built on Feb. 17, 2020, 5:07 a.m.