plotLogo: Plot sequence logo

In eahrne/SafeQuant: A Toolbox for the Analysis of Proteomics Data

Description

Plot sequence logo

Usage

plotLogo(motif, bgPeptides = "ACDEFGHIKLMNPQRSTVWY", main = "",
  targetResidues = c("S", "T", "Y"), ic.scale = F, ...)

Arguments

motif	list of target residue centered motfis
bgPeptides	peptides used to calculate residue background frequency (default uniform )
main	see plot
targetResidues	default [STY]
ic.scale	logical. If TRUE, the height of each column is proportional to its information content. Otherwise, all columns have the same height.

Note

No note

References

NA

Examples

print("No examples")

eahrne/SafeQuant documentation built on April 8, 2021, 10:10 a.m.