Files in eahrne/SpectroX
Proteotypic peptide selection and SRM/PRM/HRM panel creation
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/SpectroX.R
R/UserOptions.R
README.md
SpectroX.Rproj
exec/spectroX.R
exec/spectroXInput.pdf
exec/spectroXInput.tsv
exec/testCMDLine.R
inst/manuals/SpectroX-man.pdf
inst/manuals/mq_16_tables.pdf
inst/testData/CopyOfmsms_test.xls
inst/testData/msms_test.txt
inst/testData/msms_test_noIRT.txt
inst/testData/protein_db1.fasta
inst/testData/protein_db2.fasta
inst/testData/proteins_acs.txt
man/barplotPeptidesPerProtein.Rd
man/barplotPetideCountPerProtein.Rd
man/createComplementaryIsotopeLibrary.Rd
man/createLibrarySpectrum.Rd
man/createSpectralLibrary.Rd
man/digestProteome.Rd
man/getCMDLineOptions.Rd
man/getEmpiricalIRT.Rd
man/getFragmentSequence.Rd
man/getIRTModel.Rd
man/getPTMColors.Rd
man/getPeptides.Rd
man/getSearchedModifications.Rd
man/getUserOptions.Rd
man/parseMaxQuantMSMS.Rd
man/parseRange.Rd
man/parseTargetsFile.Rd
man/plotIRTCalibration.Rd
man/proteotypicPeptideExport.Rd
man/skylineExport.Rd
man/spectroDiveExport.Rd
man/spectronautExport.Rd
tests/testthat/testSpectroX.R
tests/testthat/testUserOptions.R
