agglomerate: Agglomerates the sample metadata, counts, and taxa info into...
In eclarke/eclectic: Miscellaneous functions for bioinformatics data
Description
Usage
Arguments
Value
Description
Agglomerates the sample metadata, counts, and taxa info into one melted df.
Usage
1
agglomerate(s, cts, taxa)
Arguments
s
appropriately-subsetted sample metadata df
cts
counts matrix (colnames should be present in column ‘SampleID’ in ‘s’)
taxa
taxonomic data (must have column named ‘otu’)
Value
the agglomerated df, invisibly
eclarke/eclectic documentation built on May 15, 2019, 7:54 p.m.
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Description Usage Arguments Value
Description
Agglomerates the sample metadata, counts, and taxa info into one melted df.
Usage
1 | agglomerate(s, cts, taxa)
|
Arguments
s |
appropriately-subsetted sample metadata df |
cts |
counts matrix (colnames should be present in column ‘SampleID’ in ‘s’) |
taxa |
taxonomic data (must have column named ‘otu’) |
Value
the agglomerated df, invisibly
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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