saturated_rainbow_cts: Saturated rainbow for counts
In eclarke/eclectic: Miscellaneous functions for bioinformatics data
Description
Adapted from qiimer::saturated_rainbow, this provides a ggplot2
scale_fill_gradientn that adopts the conventions from that scale. Namely:
The lowest-abundance taxa are in dark blue, empty taxa are white, and
highly-abundant taxa (> threshold) are in red.
Usage
1
saturated_rainbow_cts(..., na.value = "white", threshold = 0.4, scale = 1)
Arguments
...
arguments passed to scale_fill_gradientn
na.value
the color to assign to missing taxa
threshold
the proportional limit where the high-range color appears
scale
the the maximum of the proportion (i.e. is it 0-1 scaled or 0-100?)
eclarke/eclectic documentation built on May 15, 2019, 7:54 p.m.
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Description
Adapted from qiimer::saturated_rainbow, this provides a ggplot2 scale_fill_gradientn that adopts the conventions from that scale. Namely: The lowest-abundance taxa are in dark blue, empty taxa are white, and highly-abundant taxa (> threshold) are in red.
Usage
1 | saturated_rainbow_cts(..., na.value = "white", threshold = 0.4, scale = 1)
|
Arguments
... |
arguments passed to scale_fill_gradientn |
na.value |
the color to assign to missing taxa |
threshold |
the proportional limit where the high-range color appears |
scale |
the the maximum of the proportion (i.e. is it 0-1 scaled or 0-100?) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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