GetRMSE: GetRMSE returns the Root Mean Square Error between y - XB,...

In elmerfer/MIXTURE: MIXTURE: a nu-SVR based recursive feature extraction mdoel with noise constraints for molecular signature deconvolution of bulk tumor tissues

GetRMSE returns the Root Mean Square Error between y - XB, with unnormalized B>0 (absolute) or normalized sum(B)==1 (proportions)

Description

GetRMSE returns the Root Mean Square Error between y - XB, with unnormalized B>0 (absolute) or normalized sum(B)==1 (proportions)

Usage

GetRMSE(obj, type = c("proportion", "absolute"))

Arguments

obj	an object of class MIXTURE (see MIXTURE)
type	a character string "proportion" or "absolute". short word is allowed (default: "proportion")

Value

a SxK data matrix with K cell types (according to the signature matrix) and S subjects

elmerfer/MIXTURE documentation built on Aug. 20, 2024, 8:03 p.m.