LibsizeRankPlot: Rank plot of RNA-seq library sizes

In elqumsan/RNAseqMVA: Application of Multivariate Analysis methods to RNA-seq Data

Description

Plot the sizes (in million reads) of RNA-seq librairies ranked by decreasing size.

Usage

LibsizeRankPlot(
  count.table,
  parameters,
  plot.file = NULL,
  plot.width = 7,
  plot.heigh = 5
)

Arguments

count.table	a table of counts per feature, with one row per feature (e.g. gene, transcript) and one column per library (e.g. run, sample).
plot.file	if ot null, save th plot in pdf format in the specified file
plot.width=7	width of the pdf file (only works when plot.file is not null)
plot.height=5	height of the pdf file (only works when plot.file is not null)

Author(s)

Jacques van Helden

elqumsan/RNAseqMVA documentation built on March 10, 2021, 8:10 a.m.