MergeRuns: Merge read counts from different runs by sample.

In elqumsan/RNAseqMVA: Application of Multivariate Analysis methods to RNA-seq Data

Description

In ReCount data, some samples are sequenced over several runs, which increases the coverage but creates problems because technical replicates come from the same sample and are thus not independent. We thus merge the runs per sample, in order to obtain a single vector of read counts per sample.

Usage

MergeRuns(runs)

Arguments

runs	an object of the class DataTableWithClassess

Value

this is original cout table witout multipl runs per sample

• mergedRuns that is the count table after marging the runs to be original count table after get ride of the multipl run per sample.

Author(s)

Jacques van Helden and Mustafa AbuELQumsan

elqumsan/RNAseqMVA documentation built on March 10, 2021, 8:10 a.m.