API for elqumsan/RNAseqMVA
Application of Multivariate Analysis methods to RNA-seq Data
| Global functions | |
|---|---|
| DEGordering | Man page Source code |
| DataTableWithClasses | Man page Source code |
| DataTableWithTrainTestSets | Man page Source code |
| ErrorRateBoxPlot | Man page Source code |
| ExtractPhenoTable | Man page Source code |
| IterateTrainingTesting | Man page Source code |
| LibsizeBarplot | Man page Source code |
| LibsizeRankPlot | Man page Source code |
| LoadRequiredBioconductorPackages | Man page Source code |
| LoadRequiredCRANPackages | Man page Source code |
| MergeRuns | Man page Source code |
| MisclassificationEstimate | Man page Source code |
| NormalizeSamples | Man page Source code |
| RunDESeq2 | Man page Source code |
| RunDESeq2.StudyCase | Man page Source code |
| RunViRf | Man page Source code |
| RunViRf.StudyCase | Man page Source code |
| RunedgeR | Man page Source code |
| RunedgeR.StudyCase | Man page Source code |
| StratifiedSampling | Man page Source code |
| StudyCase | Man page Source code |
| SummarizeErrorTable | Man page |
| SummarizeTrainTestResults | Man page Source code |
| TrainTestResult | Man page Source code |
| TuneClassifiers | Man page Source code |
| XYplot | Man page Source code |
| XYplot.StudyCase | Source code |
| buildAttributes | Man page Source code |
| buildAttributes.DataTableWithClasses | Man page Source code |
| buildAttributes.DataTableWithTrainTestSets | Man page Source code |
| buildAttributes.default | Man page Source code |
| exportTables | Man page Source code |
| exportTables.DataTableWithClasses | Man page Source code |
| exportTables.DataTableWithTrainTestSets | Man page Source code |
| exportTables.StudyCase | Man page Source code |
| exportTables.default | Man page Source code |
| filterDataTable | Man page Source code |
| geocharFromPheno | Man page Source code |
| heatmap.TrainTestResult | Man page Source code |
| hello | Source code |
| histCountsPerGeneClass | Man page Source code |
| histCountsPerGeneClass.StudyCase | Man page Source code |
| initParallelComputing | Man page Source code |
| initRecountID | Man page Source code |
| loadCounts | Man page Source code |
| loadMemoryImage | Man page Source code |
| loadRecountExperiment | Man page Source code |
| message.with.time | Man page |
| outputParameters | Man page Source code |
| plot2PCs | Man page Source code |
| plotFigures | Man page Source code |
| plotFigures.DataTableWithClasses | Man page Source code |
| plotFilterHistograms | Man page Source code |
| plotKNNtuning | Man page Source code |
| plotRFtuning | Man page Source code |
| plotSVMtuning | Man page Source code |
| print.DataTableWithClasses | Man page Source code |
| print.DataTableWithTrainTestSets | Man page Source code |
| print.StudyCase | Man page Source code |
| print.TrainTestResult | Man page Source code |
| saveMemoryImage | Man page Source code |
| selectProjectsByCharacteristics | Man page Source code |
| summary.DataTableWithClasses | Man page Source code |
| summary.DataTableWithTrainTestSets | Man page Source code |
| summary.StudyCase | Man page Source code |
| summary.default | Man page Source code Source code |
