countKmer: Find kmers and its counts
In elulu3/LymphoSeqTest: Analyze high-throughput sequencing of T and B cell receptors
countKmer R Documentation
Find kmers and its counts
Description
Calculate counts of kmers in the query nucleotide sequence
Usage
countKmer(study_table, k)
Arguments
study_table
A tibble outputed from the readImmunoSeq function.
k
The length of kmers.
Value
A tibble with two columns: the kmers and its respective count.
Examples
file_path <- system.file("extdata", "TCRB_sequencing", package = "LymphoSeq2")
stable <- readImmunoSeq(path = file_path)
countKmer(study_table = stable, k = 5)
elulu3/LymphoSeqTest documentation built on Aug. 27, 2022, 5:47 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| countKmer | R Documentation |
Find kmers and its counts
Description
Calculate counts of kmers in the query nucleotide sequence
Usage
countKmer(study_table, k)
Arguments
study_table |
A tibble outputed from the readImmunoSeq function. |
k |
The length of kmers. |
Value
A tibble with two columns: the kmers and its respective count.
Examples
file_path <- system.file("extdata", "TCRB_sequencing", package = "LymphoSeq2")
stable <- readImmunoSeq(path = file_path)
countKmer(study_table = stable, k = 5)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.