uniqueSeqs: Unique sequences
In elulu3/LymphoSeqTest: Analyze high-throughput sequencing of T and B cell receptors
uniqueSeqs R Documentation
Unique sequences
Description
Aggregates all productive sequences within a list of data frames by duplicate_count.
Usage
uniqueSeqs(productive_table = productive_table, unique_type = "junction_aa")
Arguments
productive_table
A tibble of productive amino acid sequences
imported using the function LymphoSeq function productiveSeq where the
aggregate parameter was set to "junction_aa".
unique_type
Use "junction_aa" to aggregate by amino acid sequences.
Use "junction" to aggregate by nucleotide sequences. Default is "junction_aa".
Value
A data frame of unique amino acid sequences from the list of
data frames aggregated by duplicate_count.
elulu3/LymphoSeqTest documentation built on Aug. 27, 2022, 5:47 a.m.
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| uniqueSeqs | R Documentation |
Unique sequences
Description
Aggregates all productive sequences within a list of data frames by duplicate_count.
Usage
uniqueSeqs(productive_table = productive_table, unique_type = "junction_aa")
Arguments
productive_table |
A tibble of productive amino acid sequences imported using the function LymphoSeq function productiveSeq where the aggregate parameter was set to "junction_aa". |
unique_type |
Use "junction_aa" to aggregate by amino acid sequences. Use "junction" to aggregate by nucleotide sequences. Default is "junction_aa". |
Value
A data frame of unique amino acid sequences from the list of data frames aggregated by duplicate_count.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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