plotMGSQuality: plotMGSQuality

In eprifti/momr: Mining Metaomics Data (MetaOMineR)

plotMGSQuality

Description

Visualized scores of data variation within a given MGS cluster as well as the barcode of the MGS. A subset of 50 most connected genes is also plotted the same way.

Usage

plotMGSQuality(dat, main = "mgs", return.scores = TRUE)

Arguments

dat	: a matrix where operations will be performed on the columns. Please transpose if operations are needed in the rows. This is typically an MGS frequency matrix with genes in the rows.
main	: the name of the plot
return.scores	: weather the function should return the computed scores or not (default=TRUE).

Details

plotMGSQuality

Value

a matrix of results where scores are in the columns

Author(s)

Edi Prifti

eprifti/momr documentation built on Sept. 27, 2022, 3:36 a.m.