erictleung/dada2HPCPipe: DADA2 HPC Workflow Wrapper
16S rRNA microbiome data analysis workflow using DADA2 and R on a high performance cluster using Slurm. The functions here are wrappers around the DADA2 functions in order to more efficiently use on a cluster. The functions break down the workflow into parts based on stopping points that require a user's input for the next steps.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | MIT + file LICENSE |
| Version | 0.0.2 |
| URL | https://github.com/erictleung/dada2HPCPipe |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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