apwnd_window_internal: Compute average pairwise nucleotide diversity statistics for...
In eriqande/genoscapeRtools: Tools for building migratory bird genoscapes
Description
Usage
Arguments
Value
Description
This is the internal Rcpp function that will be called once for each window.
Usage
1
apwnd_window_internal(x, a, b)
Arguments
x
an 0,1,2,-1 integer matrix
a
the lowest (base-1) index of the SNPs in the window
b
the highest (base-1) index of the SNPs in the window
Value
This returns a list of vectors. First vector is the average pairwise nucleotide difference
for each pair of individuals. Second vector is the fraction of sites missing in the pair.
eriqande/genoscapeRtools documentation built on Dec. 27, 2021, 8:01 a.m.
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Description Usage Arguments Value
Description
This is the internal Rcpp function that will be called once for each window.
Usage
1 | apwnd_window_internal(x, a, b)
|
Arguments
x |
an 0,1,2,-1 integer matrix |
a |
the lowest (base-1) index of the SNPs in the window |
b |
the highest (base-1) index of the SNPs in the window |
Value
This returns a list of vectors. First vector is the average pairwise nucleotide difference for each pair of individuals. Second vector is the fraction of sites missing in the pair.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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