Files in eriqande/genoscapeRtools
Tools for building migratory bird genoscapes

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/RcppExports.R R/explore-missingness.R R/geno_freq_calcs.R R/genoscapeRtools-package.R R/genoscape_pca.R R/hohz_windows.R R/hwe_exact_test.R R/import.R R/pairwise_fst.R R/plink-admixture-etc.R R/qprob_rando_raster.R R/read_012.R R/read_angsd_geno_probs.R R/scan_012.R R/small_utils.R R/snp-selection.R README.Rmd README.md
data/wifl_stack.rda
development/Rmd/choosing-assays.Rmd development/Rmd/plotting-alle-freqs.Rmd development/Rmd/selecting-loci-from-alle-freqs-etc.Rmd
development/data/WIFL_Cat_forAssayDesign.txt
development/data/WIFL_Groups_forAlleleFreqCalc.txt
genoscapeRtools.Rproj
man/comp_pair.Rd man/compile_assayable.Rd man/convert_012_to_bed.Rd man/correct_ass_prob.Rd man/geno_freq_calc_single.Rd man/geno_freq_calcs.Rd man/genoscapeRtools.Rd man/genoscape_pca.Rd man/ggplot_the_Qs.Rd man/group_012_cnts.Rd man/hohz_windows_1.Rd man/hwe_exact_test.Rd man/mat_cumul_cpp.Rd man/miss_curves_indv.Rd man/miss_curves_locus.Rd man/pairwise_fst.Rd man/pipe.Rd man/qprob_rando_raster.Rd man/read_012.Rd man/read_angsd_geno_probs.Rd man/run_admixture.Rd man/sample_from_angsd_probs.Rd man/scan_012.Rd man/slurp_admixture.Rd man/testHWE.Rd
readme-figs/clean-pic-1.png
readme-figs/count-missing-1.png
readme-figs/indivs-1.png
readme-figs/loci-1.png
readme-figs/snprelate-1.png
readme-figs/snprelate-from-012-1.png
src/RcppExports.cpp
src/sample_from_angsd_probs.cpp
src/small_utils.cpp
tutorials/.gitignore
tutorials/inputs/sort_order_admixture.txt
tutorials/inputs/wifl_snp_comparison_counts.txt
tutorials/running_admixture.Rmd tutorials/running_admixture.md tutorials/selecting-wifl-assays.Rmd
tutorials/selecting-wifl-assays.nb.html
eriqande/genoscapeRtools documentation built on Feb. 5, 2018, 4:37 p.m.