Description Usage Arguments Value Examples
Displays constructed tree with node labels for the proportion of each probe state for a selected gene. This is saved at the given filename
1 2 3 4 5 6 7 | show_gene_track(
filename,
tree,
gene,
thermo_prop_internal_nodes,
thermo_prop_leaves
)
|
filename |
filename to which the plot will be saved |
tree |
ape::phylo tree |
gene |
gene name |
thermo_prop_leaves |
thermo proportion plot for leaves of all of the probe states |
thermo_prop_node |
thermo proportion plot for internal nodes of all of the probe states |
None
1 2 3 | show_gene_track('tree_CD81', tree, 'CD81', thermo_prop_internal_nodes,
thermo_prop_leaves)
... some visualization
|
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