upgma_tree: UPGMA tree construction VALIDATED
In ethanmoyer/MethylConstruct:
Description
Usage
Arguments
Value
Examples
View source: R/reconstructTree.R
Description
This function uses the UPGMA algorithm to construct a phylogenetic tree
using methylation data
Usage
1
upgma_tree(consensus_vector)
Arguments
consensus_vector
consensus vector data frame for each cell in group
names
Value
ape::phylo tree constructed using UPGMA algorithm
Examples
1
2
tree <- upgma_tree(consensus_vector)
... some visualization
ethanmoyer/MethylConstruct documentation built on July 10, 2020, 12:28 a.m.
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Description Usage Arguments Value Examples
View source: R/reconstructTree.R
Description
This function uses the UPGMA algorithm to construct a phylogenetic tree using methylation data
Usage
1 | upgma_tree(consensus_vector)
|
Arguments
consensus_vector |
consensus vector data frame for each cell in group names |
Value
ape::phylo tree constructed using UPGMA algorithm
Examples
1 2 | tree <- upgma_tree(consensus_vector)
... some visualization
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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