recursiveigraph: Modules identification by recursive community detection

In fairmiracle/MODA: MODA: MOdule Differential Analysis for weighted gene co-expression network

Description

Modules detection using igraph's community detection algorithms, when the resulted module is larger than expected, it is further devided by the same program

Usage

recursiveigraph(g, savefile, method = c("fastgreedy", "louvain"),
  maxsize = 200, minsize = 30)

Arguments

g	igraph object, the network to be partitioned
savefile	plain text, used to store module, each line as a module
method	specify the community detection algorithm
maxsize	maximal module size
minsize	minimal module size

Value

None

Author(s)

Dong Li, [e-mail]

References

Blondel, Vincent D., et al. "Fast unfolding of communities in large networks." Journal of statistical mechanics: theory and experiment 2008.10 (2008): P10008.

fairmiracle/MODA documentation built on May 16, 2019, 9:59 a.m.