comparisonModule: Server part of comparison module
In fbreitwieser/pavian: Visualize and analyze metagenomics classification results

comparisonModule

R Documentation

Server part of comparison module

Description

Server part of comparison module

Usage

comparisonModule(
  input,
  output,
  session,
  sample_data,
  tax_data,
  clade_reads,
  taxon_reads,
  datatable_opts = NULL,
  filter_func = NULL,
  tax_data_add = NULL,
  search = NULL
)

Arguments

`input`	Shiny input object.
`output`	Shiny output object.
`session`	Shiny session.
`sample_data`	A `data.frame` specifying sample names and file paths (read from a defs.csv file).
`tax_data`	TODO
`clade_reads`	TODO
`taxon_reads`	TODO
`datatable_opts`	Additional options for creating the datatable.
`filter_func`	If not NULL, `filter_func` is applied to every data.frame in `reports`.
`tax_data_add`	TODO
`search`	Search term to initialize table with.