comparisonModule: Server part of comparison module

In fbreitwieser/pavian: Visualize and analyze metagenomics classification results

Server part of comparison module

Description

Server part of comparison module

Usage

comparisonModule(
  input,
  output,
  session,
  sample_data,
  tax_data,
  clade_reads,
  taxon_reads,
  datatable_opts = NULL,
  filter_func = NULL,
  tax_data_add = NULL,
  search = NULL
)

Arguments

input	Shiny input object.
output	Shiny output object.
session	Shiny session.
sample_data	A data.frame specifying sample names and file paths (read from a defs.csv file).
tax_data	TODO
clade_reads	TODO
taxon_reads	TODO
datatable_opts	Additional options for creating the datatable.
filter_func	If not NULL, filter_func is applied to every data.frame in reports.
tax_data_add	TODO
search	Search term to initialize table with.

Value

Comparison module server functionality

fbreitwieser/pavian documentation built on Jan. 5, 2024, 1:43 a.m.