merge_reports2: Merge report files into a wide format, with column(s) for...

Description Usage Arguments Value

View source: R/comparison-merge_reports.R

Description

Merge report files into a wide format, with column(s) for each report.

Usage

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merge_reports2(my_reports, col_names = NULL, fix_taxnames = TRUE,
  update_progress = FALSE, id_cols = c("name", "taxRank", "taxID",
  "taxLineage"), numeric_cols = c("cladeReads", "taxonReads"))

Arguments

my_reports

Report data.frames.

col_names

Column names.

fix_taxnames

Check if there are differences in the taxonomies of the reports.

update_progress

Update shiny progress

id_cols

Columns for taxdata

numeric_cols

Numeric data

Value

Combined data.frame


fbreitwieser/pavian documentation built on Oct. 15, 2018, 11:06 a.m.