get_IEDB: Download and unzip IEDB database (XML export)
In fcampelo/epitopes: Processing and Feature Extraction for Epitope Data
get_IEDB R Documentation
Download and unzip IEDB database (XML export)
Description
This function is used to retrieve the full IEDB database from
IEDB and extract it to a target folder.
Usage
get_IEDB(
url = "https://www.iedb.org/downloader.php?file_name=doc/iedb_export.zip",
save_folder = NULL,
remove_zip = TRUE
)
Arguments
url
URL of the .zip file containing the full IEDB
export (XML).
save_folder
Path to folder for extracting the results. Defaults to
"iedb_yyyymmdd", where yyyymmdd is replaced by the current date.
remove_zip
logical flag: should the .zip file be deleted after
extraction?
Author(s)
Felipe Campelo (f.campelo@aston.ac.uk)
fcampelo/epitopes documentation built on April 22, 2023, 12:23 a.m.
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| get_IEDB | R Documentation |
Download and unzip IEDB database (XML export)
Description
This function is used to retrieve the full IEDB database from IEDB and extract it to a target folder.
Usage
get_IEDB(
url = "https://www.iedb.org/downloader.php?file_name=doc/iedb_export.zip",
save_folder = NULL,
remove_zip = TRUE
)
Arguments
url |
URL of the .zip file containing the full IEDB export (XML). |
save_folder |
Path to folder for extracting the results. Defaults to "iedb_yyyymmdd", where yyyymmdd is replaced by the current date. |
remove_zip |
logical flag: should the .zip file be deleted after extraction? |
Author(s)
Felipe Campelo (f.campelo@aston.ac.uk)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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