shake_fgseaResult: Convert the output of fgsea
In federicomarini/GeneTonic: Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis
shake_fgseaResult R Documentation
Convert the output of fgsea
Description
Convert the output of fgsea for straightforward use in GeneTonic()
Usage
shake_fgseaResult(fgsea_output)
Arguments
fgsea_output
A data.frame with the output of fgsea() in fgsea.
Value
A data.frame compatible for use in GeneTonic() as res_enrich
See Also
Other shakers:
shake_davidResult(),
shake_enrichResult(),
shake_enrichrResult(),
shake_gprofilerResult(),
shake_gsenrichResult(),
shake_topGOtableResult()
Examples
data(fgseaRes, package = "GeneTonic")
res_from_fgsea <- shake_fgseaResult(fgseaRes)
federicomarini/GeneTonic documentation built on March 27, 2024, 4:19 p.m.
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| shake_fgseaResult | R Documentation |
Convert the output of fgsea
Description
Convert the output of fgsea for straightforward use in GeneTonic()
Usage
shake_fgseaResult(fgsea_output)
Arguments
fgsea_output |
A data.frame with the output of |
Value
A data.frame compatible for use in GeneTonic() as res_enrich
See Also
Other shakers:
shake_davidResult(),
shake_enrichResult(),
shake_enrichrResult(),
shake_gprofilerResult(),
shake_gsenrichResult(),
shake_topGOtableResult()
Examples
data(fgseaRes, package = "GeneTonic")
res_from_fgsea <- shake_fgseaResult(fgseaRes)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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