extractKinematics.traj: Calculate a set of kinematics parameters from a single...
In federicomarini/flowcatchR: Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells
extractKinematics.traj R Documentation
Calculate a set of kinematics parameters from a single trajectory
Description
The computed set of parameters include delta.x, delta.t and delta.v
(displacements and instantaneous velocity), totalTime, totalDistance,
distStartToEnd, curvilinearVelocity, straightLineVelocity and
linearityForwardProgression, Mean Squared Displacement, velocity
autocorrelation, and more
Usage
extractKinematics.traj(
trajectoryset,
trajectoryID,
acquisitionFrequency = 30,
scala = 50
)
Arguments
trajectoryset
A TrajectorySet object
trajectoryID
The ID of a single trajectory
acquisitionFrequency
The frame rate of acquisition for the images, in
milliseconds
scala
The value of micro(?)meters to which each single pixel
corresponds
Value
A KinematicsFeatures object
Author(s)
Federico Marini, marinif@uni-mainz.de, 2014
federicomarini/flowcatchR documentation built on June 12, 2025, 3:08 p.m.
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| extractKinematics.traj | R Documentation |
Calculate a set of kinematics parameters from a single trajectory
Description
The computed set of parameters include delta.x, delta.t and delta.v
(displacements and instantaneous velocity), totalTime, totalDistance,
distStartToEnd, curvilinearVelocity, straightLineVelocity and
linearityForwardProgression, Mean Squared Displacement, velocity
autocorrelation, and more
Usage
extractKinematics.traj(
trajectoryset,
trajectoryID,
acquisitionFrequency = 30,
scala = 50
)
Arguments
trajectoryset |
A |
trajectoryID |
The ID of a single trajectory |
acquisitionFrequency |
The frame rate of acquisition for the images, in milliseconds |
scala |
The value of micro(?)meters to which each single pixel corresponds |
Value
A KinematicsFeatures object
Author(s)
Federico Marini, marinif@uni-mainz.de, 2014
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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