plot.TrajectorySet: 3D representation of a 'TrajectorySet' object

In federicomarini/flowcatchR: Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells

3D representation of a TrajectorySet object

Description

Provides a visual representation of a TrajectorySet object

Usage

## S3 method for class 'TrajectorySet'
plot(x, frames, verbose = FALSE, ...)

Arguments

x	A TrajectorySet object
frames	A Frames object, used here to identify the limits of the region of interest
verbose	Logical, whether to provide additional output on the command line
...	Arguments to be passed to methods

Details

Based on the plotly library, the function extracts the region of interests from the dimensions of an image of the Frames object, and afterwards plots the x-y-time representation of the identified trajectories

Value

plot.TrajectorySet returns an invisible NULL.

Author(s)

Federico Marini, [e-mail], 2014

Examples

data("MesenteriumSubset")
data("candidate.platelets")
platelets.trajectories <- trajectories(candidate.platelets)
## Not run: 
plot(platelets.trajectories,MesenteriumSubset)

## End(Not run)

federicomarini/flowcatchR documentation built on Dec. 21, 2024, 8:45 p.m.