normalizeFrames: Normalize the values of a 'Frames' object
In federicomarini/flowcatchR: Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells
normalizeFrames R Documentation
Normalize the values of a Frames object
Description
Applies a transformation to the Frames object in a way that the intensities
throughout the acquisition are normalized overall in term of pixel values sums.
It can be used to compensate for example a global change in the illumination values,
e.g. due to changed acquisition conditions in experiments that span long timescales.
Usage
normalizeFrames(frames, normFun = "median")
Arguments
frames
A Frames object to normalize
normFun
The normalization function chosen. Can be one of mean or median
Value
A Frames object with normalized pixel values.
Author(s)
Federico Marini, marinif@uni-mainz.de, 2014
Examples
data(MesenteriumSubset)
normalizeFrames(MesenteriumSubset,normFun="median")
federicomarini/flowcatchR documentation built on March 27, 2024, 3:29 p.m.
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| normalizeFrames | R Documentation |
Normalize the values of a Frames object
Description
Applies a transformation to the Frames object in a way that the intensities
throughout the acquisition are normalized overall in term of pixel values sums.
It can be used to compensate for example a global change in the illumination values,
e.g. due to changed acquisition conditions in experiments that span long timescales.
Usage
normalizeFrames(frames, normFun = "median")
Arguments
frames |
A |
normFun |
The normalization function chosen. Can be one of |
Value
A Frames object with normalized pixel values.
Author(s)
Federico Marini, marinif@uni-mainz.de, 2014
Examples
data(MesenteriumSubset)
normalizeFrames(MesenteriumSubset,normFun="median")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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