nano_longest: Report n longest reads of a sequencing run Takes in the...

Description Usage Arguments Value

View source: R/nanoRaw_scripts.R

Description

Report n longest reads of a sequencing run Takes in the ‘sequencing_summary' file of albacore as input and give you the ’n' longest sequences

Usage

1
nano_longest(inputfile, quality = 0, n = 5)

Arguments

inputfile

Filepath to sequencing_summary.txt output of albacore

quality

Mean quality filter option for every read

n

longest reads

Value

basic nanopore run statistics


felixgrunberger/nanoRaw documentation built on May 22, 2019, 2:23 p.m.