nano_n50: N50 of nanopore run Takes in the 'sequencing_summary' file of...

Description Usage Arguments Value

View source: R/nanoRaw_scripts.R

Description

N50 of nanopore run Takes in the 'sequencing_summary' file of albacore as input and returns the N50

Usage

1
nano_n50(inputfile, quality = 0)

Arguments

inputfile

Filepath to sequencing_summary.txt output of albacore

quality

Mean quality filter option for every read

Value

N50


felixgrunberger/nanoRaw documentation built on May 22, 2019, 2:23 p.m.