init_config_mat: initializes the bookkeeping object for population level...

In fintzij/BDAepimodel: Fit Stochastic Epidemic Models in R via Bayesian Data Augmentation

Description

initializes the bookkeeping object for population level counts

Usage

init_config_mat(epimodel, init_state, t0, tmax)

Arguments

epimodel	an epimodel list
t0	the first observation time
tmax	the final observation time

Value

initialized matrix with columns to store event times and counts of individuals in each compartment. The first and last rows of the matrix always correspond to time 0 and tmax. The state at tmax is initialized to init_state.

Examples

init_state <- c(S = 45, I = 5, R = 0)
tmax <- 5
init_pop_traj(init_state, tmax)

fintzij/BDAepimodel documentation built on Sept. 20, 2020, 1:44 p.m.