cols: hsapiens column data we are targetting
In flaviusb/homosapienDEE2CellScore: Example Data Package for CellScore
cols R Documentation
hsapiens column data we are targetting
Description
A dataframe containing metadata for the dataset we are processing; notably the accessions (which tell us the specific chunks of data to download from dee2.io) are in cols$SRR_accession
Usage
cols
Format
An object of class DFrame with 572 rows and 75 columns.
Examples
# We can use this for looking up metadata based on other metadata
# For instance, to get all the accessions for liver cells in the dataset we are analysing, run
liver_cell_accessions <-
homosapienDEE2CellScore::cols$SRR_accession[homosapienDEE2CellScore::cols$cell_type == "liver"]
flaviusb/homosapienDEE2CellScore documentation built on April 11, 2024, 1:47 p.m.
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| cols | R Documentation |
hsapiens column data we are targetting
Description
A dataframe containing metadata for the dataset we are processing; notably the accessions (which tell us the specific chunks of data to download from dee2.io) are in cols$SRR_accession
Usage
cols
Format
An object of class DFrame with 572 rows and 75 columns.
Examples
# We can use this for looking up metadata based on other metadata
# For instance, to get all the accessions for liver cells in the dataset we are analysing, run
liver_cell_accessions <-
homosapienDEE2CellScore::cols$SRR_accession[homosapienDEE2CellScore::cols$cell_type == "liver"]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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