avail_genomes: Use Illumina's iGenomes and get a list of available genomes

In flow-r/ngsflows: Robust Pipelines for Next-Generation Sequencing Analysis; A Companion Package for flowr

Description

additional details

Usage

avail_genomes(species, src, build, from = "igenomes", verbose = FALSE,
  base_url = "ftp://igenome:[e-mail]", ...)

Arguments

species	species
src	source
build	build
from	from
verbose	logical, specifying verboseness
base_url	base url to be used
...	not used

Examples

gen = avail_genomes(species = 'Homo_Sapiens', from = 'igenomes')

flow-r/ngsflows documentation built on May 16, 2019, 1:25 p.m.