split_names_fastq: split.names.fastq
In flow-r/ngsflows: Robust Pipelines for Next-Generation Sequencing Analysis; A Companion Package for flowr
Description
Given a format split the files provided. Tried and tested on fastq files
Usage
1
2
split_names_fastq(files,
format = "$samplename$_$index$_L00$lane$_R$read$_$num$.fastq.gz")
Arguments
files
a character vector of filenames, to be parsed
format
the regex type format to be used to extract information from filenames. See default format as an example.
flow-r/ngsflows documentation built on May 16, 2019, 1:25 p.m.
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Description
Given a format split the files provided. Tried and tested on fastq files
Usage
1 2 | split_names_fastq(files,
format = "$samplename$_$index$_L00$lane$_R$read$_$num$.fastq.gz")
|
Arguments
files |
a character vector of filenames, to be parsed |
format |
the regex type format to be used to extract information from filenames. See default format as an example. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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