star_index: star_index

In flow-r/ngsflows: Robust Pipelines for Next-Generation Sequencing Analysis; A Companion Package for flowr

Description

a helper function to create a index, incase it does not exits

Usage

star_index(ref_star = opts_flow$get("ref_star"),
  star_exe = opts_flow$get("star_exe"),
  ref_fasta = opts_flow$get("ref_fasta"),
  star_cpu = opts_flow$get("star_cpu"), ref_gtf = opts_flow$get("ref_gtf"))

flow-r/ngsflows documentation built on May 16, 2019, 1:25 p.m.