Description Usage Arguments Value
This function is...elaborate. It requires blast be installed and be in your PATH. This function takes your platform data file and your annotated transcriptome file and actually creates a blast database, searches all probes against it, and identifies hits that are unique and maximal (depending on your match and secondary match parameters.) It's called from nameChange.
1 | blastChange(platdata, platform, transcripts, match, secmatch)
|
platdata |
see nameChange |
platform |
curated data from nameChange |
transcripts |
see nameChange |
match |
see nameChange |
secmatch |
see nameChange |
see nameChange
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