Description Usage Arguments Value
peakPhase
1 | peakPhase(expdata, times, method = "poly")
|
expdata |
This must be an expression matrix, with rows as genes and columns as samples. Sample names (column names) must match sample names in the "times" parameter. |
times |
This must be a matrix with one column; the column is actual sampling time, and the row names are the sample names. |
method |
This allows the user to choose the method for peak time detemination; current options are "poly"(default), "sin", "spline", and "FFT". Note, FFT will only work on evenly sampled time courses (or evenly imputed time courses). |
This function returns a data frame with a single column; the row names are the gene names, and the column contains the time at which the gene is calculated to express maximally.
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