gold_standard: Reference set of human protein complexes
In fosterlab/PrInCE-R: Predicting Interactomes from Co-Elution
Description
Usage
Format
Details
Source
Description
A reference set of 467 experimentally confirmed human protein complexes,
derived from the EBI Complex Portal database.
Usage
1
Format
a list containing 467 entries (character vectors)
Details
467 protein complexes, ranging in size from 2 to 44 proteins and involving
877 proteins in total, to provide a reference set of true positive and true
negative interactions (intra- and inter-complex interactions, respectively)
for demonstration in PrInCE analysis of a co-elution dataset.
Other "gold standards" are possible in practice, most notably the CORUM
database; however, the Complex Portal reference set is included in this
package due to its CC-BY license.
Source
https://www.ebi.ac.uk/complexportal/complex/organisms
fosterlab/PrInCE-R documentation built on Dec. 11, 2020, 3:51 p.m.
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Description Usage Format Details Source
Description
A reference set of 467 experimentally confirmed human protein complexes, derived from the EBI Complex Portal database.
Usage
1 |
Format
a list containing 467 entries (character vectors)
Details
467 protein complexes, ranging in size from 2 to 44 proteins and involving 877 proteins in total, to provide a reference set of true positive and true negative interactions (intra- and inter-complex interactions, respectively) for demonstration in PrInCE analysis of a co-elution dataset. Other "gold standards" are possible in practice, most notably the CORUM database; however, the Complex Portal reference set is included in this package due to its CC-BY license.
Source
https://www.ebi.ac.uk/complexportal/complex/organisms
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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