Files in fosterlab/PrInCE-R
Predicting Interactomes from Co-Elution
.Rbuildignore
.gitignore
.lintr
DESCRIPTION
LICENSE
NAMESPACE
R/PrInCE.R
R/adjacency_matrix_from_data_frame.R
R/adjacency_matrix_from_list.R
R/build_gaussians.R
R/calculate_autocorrelation.R
R/calculate_features.R
R/calculate_precision.R
R/check_gaussians.R
R/choose_gaussians.R
R/clean_profile.R
R/clean_profiles.R
R/co_apex.R
R/concatenate_features.R
R/detect_complexes.R
R/filter_profiles.R
R/fit_curve.R
R/fit_gaussians.R
R/gaussian_aic.R
R/gold_standard.R
R/impute_neighbors.R
R/is_unweighted.R
R/is_weighted.R
R/kristensen.R
R/kristensen_gaussians.R
R/make_feature_from_data_frame.R
R/make_feature_from_expression.R
R/make_initial_conditions.R
R/make_labels.R
R/match_matrix_dimensions.R
R/predict_ensemble.R
R/predict_interactions.R
R/replace_missing_data.R
R/scott.R
R/scott_gaussians.R
R/threshold_precision.R
README.md
data-raw/README.md
data-raw/homo_sapiens.tsv.gz
data-raw/preprocess-EBI-Complex-Portal.R
data-raw/preprocess-Kristensen-NatMeth-2012-gaussians.R
data-raw/preprocess-Kristensen-NatMeth-2012.R
data-raw/preprocess-Scott-MSB-2017-gaussians.R
data-raw/preprocess-Scott-MSB-2017.R
data/gold_standard.rda
data/kristensen.rda
data/kristensen_gaussians.rda
data/scott.rda
data/scott_gaussians.rda
inst/REFERENCES.bib
man/PrInCE.Rd
man/adjacency_matrix_from_data_frame.Rd
man/adjacency_matrix_from_list.Rd
man/aic.Rd
man/build_gaussians.Rd
man/calculate_autocorrelation.Rd
man/calculate_features.Rd
man/calculate_precision.Rd
man/check_gaussians.Rd
man/choose_gaussians.Rd
man/clean_profile.Rd
man/clean_profiles.Rd
man/co_apex.Rd
man/concatenate_features.Rd
man/detect_complexes.Rd
man/filter_profiles.Rd
man/fit_curve.Rd
man/fit_gaussians.Rd
man/gold_standard.Rd
man/impute_neighbors.Rd
man/is_unweighted.Rd
man/is_weighted.Rd
man/kristensen.Rd
man/kristensen_gaussians.Rd
man/make_feature_from_data_frame.Rd
man/make_feature_from_expression.Rd
man/make_initial_conditions.Rd
man/make_labels.Rd
man/match_matrix_dimensions.Rd
man/predict_ensemble.Rd
man/predict_interactions.Rd
man/replace_missing_data.Rd
man/scott.Rd
man/scott_gaussians.Rd
man/threshold_precision.Rd
vignettes/bibliography.bib
vignettes/intro-to-prince.Rmd
vignettes/pnas.csl
vignettes/schematic.png
