phylo2p: Convert phylo object on a list with 3 vectors: waiting times,...

In franciscorichter/dmea: Diversification and Macro-Evolution Analysis

Usage

phylo2p(tree)

Arguments

tree	Object of class phylo

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (tree)
{
    ltt = ltt.plot.coords(tree)
    t = diff(ltt[, 1])
    ltt = ltt[-1, ]
    n = ltt[, 2]
    E = diff(n)
    n = n[-length(n)]
    E[E == -1] = 0
    return(list(t = t, E = E, n = n))
  }

franciscorichter/dmea documentation built on May 16, 2019, 1:54 p.m.