gwas_table: GWAS catalog table
In frhl/genoppi-v4: genoppi
Description
Usage
Format
Source
See Also
Description
A table containing 190,668 genetic associations in GWAS catalog. SNP data are based on dbSNP Build 152.
Usage
1
Format
data.frame object with: PUBMEDID, DISEASE.TRAIT, SNP, P.VALUE, SUTDY.ACCESSION
Source
gwas_catalog_v1.0.2-associations_e98_r2020-03-08.tsv file downloaded from GWAS catalog: https://www.ebi.ac.uk/gwas/docs/file-downloads.
See Also
Other datasets:
accession_gene_table,
example_data,
genes_snps,
gnomad_table,
goa_bp_table,
goa_cc_table,
goa_mf_table,
hgnc_group_table,
inweb_hash,
msigdb_c1_table,
msigdb_c2_table,
msigdb_c3_table,
msigdb_c4_table,
msigdb_c5_table,
msigdb_c6_table,
msigdb_c7_table,
msigdb_h_table
frhl/genoppi-v4 documentation built on May 5, 2020, 7:16 a.m.
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Description Usage Format Source See Also
Description
A table containing 190,668 genetic associations in GWAS catalog. SNP data are based on dbSNP Build 152.
Usage
1 |
Format
data.frame object with: PUBMEDID, DISEASE.TRAIT, SNP, P.VALUE, SUTDY.ACCESSION
Source
gwas_catalog_v1.0.2-associations_e98_r2020-03-08.tsv file downloaded from GWAS catalog: https://www.ebi.ac.uk/gwas/docs/file-downloads.
See Also
Other datasets:
accession_gene_table,
example_data,
genes_snps,
gnomad_table,
goa_bp_table,
goa_cc_table,
goa_mf_table,
hgnc_group_table,
inweb_hash,
msigdb_c1_table,
msigdb_c2_table,
msigdb_c3_table,
msigdb_c4_table,
msigdb_c5_table,
msigdb_c6_table,
msigdb_c7_table,
msigdb_h_table
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