fasta_id_short: extract the "short ID" from a fasta header.
In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline
fasta_id_short R Documentation
extract the "short ID" from a fasta header.
Description
for uniprot, a "short ID" is the accession between the pipe symbols.
for all other types, remove <dot><record's version number>.
Usage
fasta_id_short(id, fasta_id_type = "uniprot")
Arguments
id
array of fasta identifiers. eg; results from fasta_header_to_id()
fasta_id_type
fasta type. if uniprot, the 'short ID' is the accession between the pipe symbols
ftwkoopmans/msdap documentation built on March 5, 2025, 12:15 a.m.
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| fasta_id_short | R Documentation |
extract the "short ID" from a fasta header.
Description
for uniprot, a "short ID" is the accession between the pipe symbols.
for all other types, remove <dot><record's version number>.
Usage
fasta_id_short(id, fasta_id_type = "uniprot")
Arguments
id |
array of fasta identifiers. eg; results from fasta_header_to_id() |
fasta_id_type |
fasta type. if uniprot, the 'short ID' is the accession between the pipe symbols |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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