get_column_intensity: prioritized selection of intensity column in a peptides...
In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline
get_column_intensity R Documentation
prioritized selection of intensity column in a peptides tibble
Description
if a column with intensity values for a specified contrasts exists, return it
all_group filtering in "intensity_all_group" column
custom filtering in "intensity_norm" column
raw data in "intensity" column
Usage
get_column_intensity(peptides, contr_lbl = NA)
Arguments
peptides
peptides tibble, e.g. dataset$peptides
contr_lbl
optionally a string describing a contrast, e.g. "contrast: WT vs KO"
Details
returns a named array of length 1 where the name is a "pretty print label" and value is the column name
ftwkoopmans/msdap documentation built on March 5, 2025, 12:15 a.m.
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| get_column_intensity | R Documentation |
prioritized selection of intensity column in a peptides tibble
Description
if a column with intensity values for a specified contrasts exists, return it
all_group filtering in "intensity_all_group" column
custom filtering in "intensity_norm" column
raw data in "intensity" column
Usage
get_column_intensity(peptides, contr_lbl = NA)
Arguments
peptides |
peptides tibble, e.g. dataset$peptides |
contr_lbl |
optionally a string describing a contrast, e.g. "contrast: WT vs KO" |
Details
returns a named array of length 1 where the name is a "pretty print label" and value is the column name
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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