get_samples_for_regression: collect the respective subset of samples for selected protein...
In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline
get_samples_for_regression R Documentation
collect the respective subset of samples for selected protein data and prepare a metadata table for regression
Description
From sample metadata (dataset$samples), get the subset that is included in the
parameter protein_data, select columns that contain potential regression variables
(using user_provided_metadata()) and finally apply enforce_sample_value_types() to
reformat all variables (except "sample_id") to factor or numeric.
Usage
get_samples_for_regression(dataset, protein_data)
Arguments
dataset
your dataset
protein_data
output from get_protein_matrix()
ftwkoopmans/msdap documentation built on March 5, 2025, 12:15 a.m.
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| get_samples_for_regression | R Documentation |
collect the respective subset of samples for selected protein data and prepare a metadata table for regression
Description
From sample metadata (dataset$samples), get the subset that is included in the
parameter protein_data, select columns that contain potential regression variables
(using user_provided_metadata()) and finally apply enforce_sample_value_types() to
reformat all variables (except "sample_id") to factor or numeric.
Usage
get_samples_for_regression(dataset, protein_data)
Arguments
dataset |
your dataset |
protein_data |
output from |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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