import_maxquant_proteingroups: Import peptide-to-protein mappings from MaxQuant

In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline

Import peptide-to-protein mappings from MaxQuant

Description

Import peptide-to-protein mappings from MaxQuant

Usage

import_maxquant_proteingroups(path, remove_shared = T)

Arguments

path	the directory that contains the search results (typically the 'txt' filter that contains files 'proteinGroups.txt' and 'evidence.txt')
remove_shared	remove all shared peptides that could not be assigned to a single proteingroup as a unique- or razor-peptide ?

ftwkoopmans/msdap documentation built on March 5, 2025, 12:15 a.m.