Man pages for furqan915/Epi-gene
EASY HANDLING OF GENOMES
| accessory_gen | Extract the representative Accessory Gene sequences. |
| accessorygenes | Returns the Number of Accessory Gene sequences. |
| annotat | Locally aligned the entered sequences with any given... |
| clust_bin | Clusters all the genome sequences and returns binary... |
| clust_id | Clusters all the genome sequences and returns pan-matrix... |
| concatenate | concatenate all the Gene/Genome sequences. |
| convert | Convert all the fasta formatted Gene/Genome sequences to txt... |
| core_gen | Extract the representative Core Gene sequences. |
| coregenes | Returns the Number of Core Gene sequences. |
| distGen | Generate a distance matrix table based on the binary... |
| heatgen1 | Generate a Denrogram and heatmap based on the binary... |
| heatgen2 | Generate heatmap based on presence/absence of gene. |
| joinfasta | Join all the fasta formatted Gene/Genome sequences in the... |
| panGen | Enumerates the Gene sequences present in all the genomes. |
| predORFaa | Predicts and writes the amino acid sequences of ORF in Genome... |
| predORFnuc | Predicts and writes the nucleotide sequences of ORF in Genome... |
| relabel | Relabel the Gene/Genome sequences. |
| sortbylength | Sort the Gene/Genome sequences by length (A necessary step... |
| uniq_gen | Extract the representative Unique Gene sequences. |
| Uniqgenes | Returns the Number of Unique Gene sequences. |
