accessory_gen: Extract the representative Accessory Gene sequences.
In furqan915/Epi-gene: EASY HANDLING OF GENOMES
Description
Usage
Arguments
Value
Examples
View source: R/accessory_gen.R
Description
Extract the representative Accessory Gene sequences.
Usage
1
accessory_gen(inputFiles, organisms, outputFiles)
Arguments
inputFiles
user defined name of previously clustered file with fasta format.
organisms
A number.
outputFiles
User defined name of the file with fasta extension
Value
Number of accessory gene sequences in outputFiles present in pan-genome consisting of organisms included in this pan-genome study.
Examples
1
2
accessory_gen("clusters.fasta", 14, "access.fasta")
accessory_gen(inputFiles, 14, outputFile)
furqan915/Epi-gene documentation built on May 18, 2019, 2:34 a.m.
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Description Usage Arguments Value Examples
View source: R/accessory_gen.R
Description
Extract the representative Accessory Gene sequences.
Usage
1 | accessory_gen(inputFiles, organisms, outputFiles)
|
Arguments
inputFiles |
user defined name of previously clustered file with fasta format. |
organisms |
A number. |
outputFiles |
User defined name of the file with fasta extension |
Value
Number of accessory gene sequences in outputFiles present in pan-genome consisting of organisms included in this pan-genome study.
Examples
1 2 | accessory_gen("clusters.fasta", 14, "access.fasta")
accessory_gen(inputFiles, 14, outputFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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