uniq_gen: Extract the representative Unique Gene sequences.

Description Usage Arguments Value Examples

View source: R/uniq_gen.R

Description

Extract the representative Unique Gene sequences.

Usage

1
uniq_gen(inputFiles, uniq, outputFiles)

Arguments

inputFiles

user defined name of previously clustered file with fasta format.

uniq

Least number of organisms e.g. 1.

outputFiles

User defined name of the file with fasta extension

Value

Number of unique gene sequences in outputFiles present in pan-genome consisting of organisms included in this pan-genome study.

Examples

1
2
uniq_gen("clusters.fasta", 1, "uniq.fasta")
uniq_gen(inputFiles, 1, outputFile)

furqan915/Epi-gene documentation built on May 18, 2019, 2:34 a.m.