getLODValues: Get LOD values.

Description Usage Arguments Value

View source: R/getLODValues.R

Description

Get the LOD value at each of the specified map positions in the given LOD profile.

Usage

1
getLODValues(x, loc, lodcolumn = NULL)

Arguments

x

A scanone object or equivalent data.frame in which the data columns contain LOD score values.

loc

Locus mapframe specifying map positions.

lodcolumn

In a scanone or equivalent object, this parameter indicates which LOD column to consider. In other objects with LOD-column-associated elements, this parameter indicates which LOD-column-associated element to consider. This must be either a LOD column name or an index with respect to the set of LOD columns. If no LOD column is specified and one such column is found, that column is used by default; otherwise a LOD column must be specified.

Value

Vector of LOD values. Returns NA if LOD score is not available at a given position.


gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.