crossesEqual: Test if two 'R/qtl' 'cross' objects are essentially equal.

In gact/shmootl: QTL Analysis Utilities for Yeast

Description

This uses the R/qtl function comparecrosses to check if two input cross objects are essentially equal, with key elements being identical, and numeric values being equal (within the given tolerance).

Usage

crossesEqual(cross1, cross2, tol = 1e-05)

Arguments

cross1	An R/qtl cross object.
cross2	An R/qtl cross object.
tol	Tolerance for comparing numeric values.

Value

Returns TRUE if the two input cross objects are essentially equal. Otherwise, this function returns a character vector describing an observed difference between the two cross objects.

See Also

R/qtl manual

Other cross object functions: getIdColIndex, getPhenoColIndices, hasTimeSeriesPhenotypes, inferStrainIndices, inferTetradIndices, inferTimeStep, interpTimeSeries, padTimeSeries, permCross, permIndices, pull.alleles, pull.chr, pull.crosstype, pull.ind, readCrossCSV, readCrossHDF5, writeCrossCSV, writeCrossHDF5

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.